Metabolites

Citrate

First intermediate of the Krebs cycle. Also shuttles acetyl-CoA from mitochondria for fat synthesis.

Citrate pathway diagram

Citrate (citric acid) is the first intermediate of the Krebs cycle (also called the citric acid cycle), formed when acetyl-CoA condenses with oxaloacetate via citrate synthase. This six-carbon molecule is subsequently processed through the cycle to generate energy.

Beyond energy production, citrate serves as a key metabolic signal and shuttle: When cellular energy is high, citrate accumulates and is exported from mitochondria. In the cytoplasm, ATP-citrate lyase cleaves it back to acetyl-CoA and oxaloacetate. This cytoplasmic acetyl-CoA is used for fatty acid synthesis and cholesterol synthesis.

Citrate inhibits phosphofructokinase (PFK), a key glycolytic enzyme - when energy is abundant, this slows glucose breakdown. It also activates acetyl-CoA carboxylase, promoting fat synthesis when energy is plentiful. Citrate binds calcium and other minerals in urine, preventing kidney stone formation.

Potassium citrate supplementation is used to prevent calcium oxalate and uric acid kidney stones. Citrate also enhances mineral absorption when used as mineral salt forms (magnesium citrate, calcium citrate). In the context of metabolic dysfunction, impaired citrate cycle flow (from nutrient deficiencies or mitochondrial issues) can limit energy production and cause citrate to back up or be diverted inappropriately.

Citrate Discussion